Steven Stancic
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Thomas A. Christensen II
Steven Stancic
Andrea Lu
Dana Mitzel
William Wilson
Rachel Palinski
Viral populations within an infected host are composed of viral particles with a
spectrum of genetic mutations rather than a unified genome. This phenomenon is
referred to as viral “quasispecies,” and has been useful for the understanding
of viral transmission and early detection of new viral variants. Next generation
sequencing (NGS) has enabled the study of these quasispecies for many viral
species, notably Influenza A and B, Human Immunodeficiency Virus (HIV), Foot and
Mouth …